Can a wisdom tooth experience pain even if it’s not bacteria related? Yes, in fact, some can be natural manifestations that the body is developing. Of course, it still a primary reason to have toothaches when food debris accumulates on a hole in wisdom tooth. Pericoronitis is one example of this dental health problem. Adults may expect pain from impacted wisdom teeth once your teeth and gums start to move. Children may also expect to see a hole in wisdom tooth if they don’t begin to take care of this dental concern.